BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016A12LP1|AL426948
(854 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1766 1230 0.0
>3x_Contig1766
Length = 23951
Score = 1230 bits (608), Expect = 0.0
Identities = 796/854 (93%), Gaps = 26/854 (3%)
Strand = Plus / Plus
Query: 1 atctcaagaattgagaccatagtacctagagtagttgcgcggcaggtgggtkattgaaat 60
|||||||||||||||||||||||||| | ||||||| |||| ||||| ||||||||
Sbjct: 10234 atctcaagaattgagaccatagtaccaa---tagttgcc--gcagttgggttattgaaat 10288
Query: 61 aagtcttgaaawgagtgggccagtgataagaccagacactarcaccgttgatccgtagcc 120
||||||||||| |||||||||||||| |||||||| || |||| |||||| ||||||
Sbjct: 10289 aagtcttgaaata--tgggccagtgataataccagaca-taacacc-ttgatc-gtagcc 10343
Query: 121 aaacaaaaatacgcctagtgagcacaaatatcgatgtgaagtacaatagagttcttcccg 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 10344 aaacaaaaatacgcctagtga-cacaaatatcgatgtgaagtacaatagagttcttcccg 10402
Query: 181 tcaaataagtatccttaacctgwaagtgatcagtgtagcyaggtggaawacgttgttgat 240
|||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||
Sbjct: 10403 tcaaataagtatccttaacctgtaagtgatcagtgtagctaggtggaatacgttgttgat 10462
Query: 241 ctaatggttgarcatttggaggaattacaattccgtyagttccgccaacggcatttggma 300
||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 10463 ctaatggttgaacatttggaggaattacaattccgttagttccgccaacggcatttggaa 10522
Query: 301 tgttgamactgtttctaaattgtagctgatcagaattcttcaaagcagattccttgaaca 360
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10523 tgttgaaactgtttctaaattgtagctgatcagaattcttcaaagcagattccttgaaca 10582
Query: 361 aagawggatwtcccggtgttctgcagaattctcggagcagcctattctctgtcagtggtg 420
|||| |||| ||||||| ||||||| |||| ||||||| ||| |||| |||||||||||
Sbjct: 10583 aagatggatttcccggt-ttctgca--attc-cggagca-cct-ttct-tgtcagtggtg 10635
Query: 421 tccaaaggtgatggactattagtcatacacatcagatatccgtatgtgamgatacccctc 480
|||||||||||||||||||| ||||| | | ||||||||||| ||| |||||||||
Sbjct: 10636 tccaaaggtgatggactatt-gtcatcctc----gatatccgtat-tgacgatacccct- 10688
Query: 481 ggacgaatttttgtyatgcctatctttatcggtactatcagacatgatgacgatattsgg 540
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 10689 ggacgaatttttgttatgcctatctttatcggtactatcagacatgatgacgatattggg 10748
Query: 541 aggacaggtgtaaaaaaaagtcagaagaccagcagtatattcagccgagccaaagtgawm 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10749 aggacaggtgtaaaaaaaagtcagaagaccagcagtatattcagccgagccaaagtgaac 10808
Query: 601 tatcgattgwhagaattcaagaggctaactttattcgagtaatgtcacgagtcttgcttg 660
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10809 tatcgattgaaagaattcaagaggctaactttattcgagtaatgtcacgagtcttgcttg 10868
Query: 661 cagagagtatctaaagaacaaattccggggtaattgamataggagaatcgaatgttaaag 720
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 10869 cagagagtatctaaagaacaaattccggggtaattgaaataggagaatcgaatgttaaag 10928
Query: 721 taataacgctctaaatttcagaccctgkgtcagcwawayagcactatcggtgaaattwct 780
||||||||||||||||||||||||||| |||||| | | |||||||||||||||||| ||
Sbjct: 10929 taataacgctctaaatttcagaccctg-gtcagcaaaacagcactatcggtgaaattact 10987
Query: 781 ttgcgagatgtgaacgaaaaacaacctattaagcgtaaacaggtatgccagtattgccta 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10988 ttgcgagatgtgaacgaaaaacaacctattaagcgtaaacaggtatgccagtattgccta 11047
Query: 841 tgctatatatktaa 854
|||||||||| |||
Sbjct: 11048 tgctatatatgtaa 11061
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3848
Number of Sequences: 1807
Number of extensions: 3848
Number of successful extensions: 79
Number of sequences better than 1.0e-20: 1
length of query: 854
length of database: 10,358,551
effective HSP length: 16
effective length of query: 838
effective length of database: 10,329,639
effective search space: 8656237482
effective search space used: 8656237482
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.8 bits)
S2: 49 (99.6 bits)